Basic Information
Locus ID:
Sgl64508
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Short Name:
CPK4
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA7 | 24160654 | 24168164 | - | Sgl64508 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.86 | 59,791.98 Da | 38.95 | 86.67 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 116 | 161 | 8.28815E-10 | IPR002048 |
| CDD | cd00051 | EFh | 174 | 220 | 1.66051E-9 | IPR002048 |
| CDD | cd00051 | EFh | 401 | 460 | 2.54567E-17 | IPR002048 |
| CDD | cd00051 | EFh | 473 | 518 | 4.04699E-9 | IPR002048 |
| Pfam | PF13833 | EF-hand domain pair | 117 | 162 | 1.4E-7 | IPR002048 |
| Pfam | PF13405 | EF-hand domain | 473 | 500 | 9.3E-8 | IPR002048 |
| Pfam | PF13405 | EF-hand domain | 174 | 201 | 9.3E-8 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 401 | 461 | 2.7E-11 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 303 | 353 | 1.5E-8 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 20 | 68 | 2.5E-8 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 299 | 376 | 1.37E-12 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 392 | 518 | 1.46E-37 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 12 | 99 | 3.16E-13 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 116 | 219 | 4.48E-28 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 360 | 521 | 9.7E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 12 | 68 | 5.1E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 298 | 353 | 1.1E-14 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 79 | 231 | 7.2E-32 | - |
| SMART | SM00054 | efh_1 | 137 | 165 | 0.0061 | IPR002048 |
| SMART | SM00054 | efh_1 | 400 | 428 | 5.3E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 173 | 201 | 0.015 | IPR002048 |
| SMART | SM00054 | efh_1 | 472 | 500 | 0.015 | IPR002048 |
| SMART | SM00054 | efh_1 | 436 | 464 | 0.0061 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 396 | 431 | 15.266581 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 432 | 467 | 11.612284 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 133 | 168 | 11.612284 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 68 | 8.937648 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 468 | 503 | 15.210791 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 169 | 204 | 15.210791 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 409 | 421 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 182 | 194 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 445 | 457 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 481 | 493 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 146 | 158 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G35670.1 | calcium-dependent protein kinase 2. Encodes a Ca(2+)-dependent, calmodulin-independent protein kinase that is rapidly induced by drought and high-salt stress but not by low-temperature stress or heat stress. Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4. | 0 |
| RefSeq | XP_010062000.1 | calcium-dependent protein kinase 11 [Eucalyptus grandis] | 0 |
| Q7XIM0 | Calcium-dependent protein kinase 17 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK17 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8S9KXQ3 | Calcium-dependent protein kinase OS=Brassica cretica OX=69181 GN=F2Q68_00012394 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||