Basic Information
Locus ID:
Sgl63850
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
acid phosphatase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA7 | 13960738 | 13962237 | - | Sgl63850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.23 | 53,226.67 Da | 31.31 | 90.79 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01650 | RT_nLTR_like | 294 | 466 | 1.86261E-38 | - |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 301 | 465 | 1.0E-31 | IPR000477 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 252 | 463 | 6.23E-14 | IPR043502 |
| SUPERFAMILY | SSF56219 | DNase I-like | 3 | 74 | 2.34E-7 | IPR036691 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 2 | 75 | 4.0E-7 | IPR036691 |
| ProSiteProfiles | PS50878 | Reverse transcriptase (RT) catalytic domain profile. | 281 | 466 | 9.285597 | IPR000477 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20520.1 | RNA binding;RNA-directed DNA polymerases. | 0 |
| RefSeq | XP_048497307.1 | uncharacterized protein LOC104885230 [Beta vulgaris subsp. vulgaris] | 0 |
| P14381 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1 | 0 | |
| TrEMBL | A0A2N9EFY0 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1490 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||