Basic Information
Locus ID:
Sgl63653
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Short Name:
CERK1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA7 | 11660176 | 11669596 | + | Sgl63653 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 63,398.17 Da | 35.98 | 91.64 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 295 | 561 | 3.01422E-86 | - |
| CDD | cd00118 | LysM | 33 | 77 | 9.50366E-5 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 290 | 555 | 2.0E-46 | IPR001245 |
| Pfam | PF01476 | LysM domain | 34 | 78 | 1.5E-4 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 279 | 558 | 3.1E-75 | IPR011009 |
| SUPERFAMILY | SSF54106 | LysM domain | 33 | 78 | 4.97E-6 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 360 | 567 | 5.6E-55 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 25 | 83 | 1.1E-9 | IPR036779 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 268 | 359 | 1.2E-25 | - |
| SMART | SM00220 | serkin_6 | 289 | 562 | 3.3E-42 | IPR000719 |
| SMART | SM00257 | LysM_2 | 33 | 78 | 5.2E-4 | IPR018392 |
| SMART | SM00257 | LysM_2 | 159 | 201 | 9.3 | IPR018392 |
| SMART | SM00257 | LysM_2 | 94 | 140 | 0.83 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 289 | 562 | 38.788654 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 32 | 77 | 10.926193 | IPR018392 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 404 | 416 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 295 | 317 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_021856598.1 | chitin elicitor receptor kinase 1-like isoform X1 [Spinacia oleracea] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LB77 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology