Basic Information
Locus ID:
Sgl62650
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA7 | 4730914 | 4732438 | + | Sgl62650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 42,716.34 Da | 42.94 | 73.99 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12819 | Malectin-like domain | 86 | 381 | 1.6E-29 | IPR024788 |
| Gene3D | G3DSA:2.60.120.430 | - | 252 | 386 | 2.7E-25 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 34 | 209 | 7.9E-13 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_021739425.1 | receptor-like protein kinase FERONIA [Chenopodium quinoa] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LCB4 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah035594 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl62650, Sgl67211, Sgl67272 |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.2BG0019900, CQ.Regalona.r1.2BG0019920 ... |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG03.512 |