Basic Information
Locus ID:
Sgl62411
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA7 | 3225618 | 3235622 | + | Sgl62411 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 104,166.83 Da | 50.07 | 62.80 | -0.94 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 710 | 754 | 0.00273635 | IPR002999 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 707 | 747 | 1.73E-5 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 49 | 246 | 1.87E-8 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 697 | 756 | 1.8E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 762 | 786 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 386 | 409 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 546 | 668 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 762 | 969 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 708 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 427 | 496 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 826 | 862 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 954 | 969 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 675 | 691 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 787 | 818 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 281 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 504 | 524 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 900 | 923 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 869 | 885 | - | - |
| Coils | Coil | Coil | 916 | 936 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.1 | 0 | |
| RefSeq | XP_021864681.1 | neurofilament heavy polypeptide isoform X1 [Spinacia oleracea] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R3I5 | Tudor domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_111020 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology