Basic Information
Locus ID:
Sgl62289
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA7 | 2441142 | 2444948 | + | Sgl62289 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 116,567.66 Da | 35.64 | 102.03 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 524 | 561 | 2.7E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 144 | 203 | 4.6E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 690 | 966 | 2.4E-47 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 289 | 311 | 0.58 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 67 | 1.4E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 667 | 968 | 8.77E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 344 | 634 | 7.03E-34 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 73 | 382 | 4.39E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 384 | 454 | 1.2E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 143 | 1.0E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 383 | 1.8E-26 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 671 | 767 | 4.2E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 206 | 4.2E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 207 | 288 | 1.6E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 455 | 639 | 1.9E-37 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 768 | 974 | 1.2E-60 | - |
| SMART | SM00369 | LRR_typ_2 | 94 | 117 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 500 | 524 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 191 | 215 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 335 | 359 | 89.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 240 | 264 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 311 | 334 | 220.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 688 | 992 | 3.2E-27 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 548 | 571 | 29.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 526 | 549 | 7.357723 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 688 | 974 | 36.612019 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 819 | 831 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 694 | 717 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 524 | 537 | 6.0E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 290 | 303 | 6.0E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021739110.1 | receptor-like protein kinase HSL1 [Chenopodium quinoa] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LBI9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology