Basic Information
Locus ID:
Sgl61533
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB6 | 54575797 | 54576771 | - | Sgl61533 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.66 | 36,732.52 Da | 52.23 | 80.86 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 278 | 314 | 4.6E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 276 | 319 | 1.01E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 200 | 320 | 6.0E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 214 | 313 | 4.5E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 214 | 314 | 10.33534 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 232 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 232 | 279 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80400.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_048493056.1 | uncharacterized RING finger protein P32A8.03c-like [Beta vulgaris subsp. vulgaris] | 0 |
| Q7ZW78 | E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1J6IK35 | E3 ubiquitin-protein ligase ring1-like protein OS=Nicotiana attenuata OX=49451 GN=A4A49_12593 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||