Basic Information
Locus ID:
Sgl61360
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB6 | 53366771 | 53374805 | + | Sgl61360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 47,995.82 Da | 37.39 | 100.48 | 0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 12 | 385 | 6.51405E-60 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 12 | 383 | 2.1E-23 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 12 | 394 | 1.44E-34 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 10 | 385 | 3.7E-36 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 1 | 194 | 8.506297 | IPR020846 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 391 | 415 | - | - |
| Coils | Coil | Coil | 384 | 414 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.2 | - | 0 |
| RefSeq | XP_010690317.1 | hippocampus abundant transcript 1 protein [Beta vulgaris subsp. vulgaris] | 0 |
| Q5SR56 | Hippocampus abundant transcript-like protein 1 OS=Homo sapiens OX=9606 GN=MFSD14B PE=1 SV=3 | 0 | |
| TrEMBL | A0A0K9QD99 | MFS domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_192340 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology