Basic Information
Locus ID:
Sgl59987
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB6 | 44345705 | 44363674 | + | Sgl59987 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 17,776.89 Da | 72.12 | 73.78 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 11 | 149 | 1.66259E-74 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 12 | 148 | 1.1E-52 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 3 | 154 | 2.62E-63 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 3 | 152 | 2.2E-67 | IPR016135 |
| SMART | SM00212 | ubc_7 | 11 | 154 | 1.0E-68 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 8 | 154 | 60.190868 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 81 | 96 | - | IPR023313 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02760.1 | ubiquiting-conjugating enzyme 2. ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene. | 0 |
| RefSeq | XP_027369134.1 | ubiquitin-conjugating enzyme E2 2 isoform X2 [Abrus precatorius] | 0 |
| P42745 | Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana OX=3702 GN=UBC2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A371I8N4 | Ubiquitin-conjugating enzyme E2 2 (Fragment) OS=Mucuna pruriens OX=157652 GN=UBC2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology