HalophFGD

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Basic Information
Locus ID: Sgl59310
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chrB6 38549689 38551332 + Sgl59310
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.82 62,943.63 Da 55.71 76.31 -0.66
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Gene3D G3DSA:3.30.420.10 - 207 471 2.5E-40 IPR036397
MobiDBLite mobidb-lite consensus disorder prediction 42 81 - -
MobiDBLite mobidb-lite consensus disorder prediction 516 547 - -
MobiDBLite mobidb-lite consensus disorder prediction 517 547 - -
MobiDBLite mobidb-lite consensus disorder prediction 60 81 - -
Coils Coil Coil 70 90 - -
Gene Ontology
Molecular Function:
GO:0003676 (nucleic acid binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_010694678.2 uncharacterized protein LOC104907443 [Beta vulgaris subsp. vulgaris] 0
TrEMBL J3S7K7 Mariner transposase OS=Beta vulgaris subsp. vulgaris OX=3555 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 6 Ah006213, Ah010759, Ah019887, Ah031043, Ah032641, Ah033162
Amaranthaceae Beta vulgaris 2 BVRB_1g014360, BVRB_7g166780
Amaranthaceae Salicornia bigelovii 7 Sbi_jg19944, Sbi_jg25545, Sbi_jg44952, Sbi_jg48193 ...
Sbi_jg51365, Sbi_jg53934, Sbi_jg7308
Amaranthaceae Salicornia europaea 2 Seu_jg10539, Seu_jg27544
Amaranthaceae Suaeda aralocaspica 8 GOSA_00003954, GOSA_00008894, GOSA_00013904, GOSA_00018345 ...
GOSA_00019430, GOSA_00023386, GOSA_00024645, GOSA_00027346
Amaranthaceae Suaeda glauca 21 Sgl00164, Sgl02767, Sgl05214, Sgl17655, Sgl22329, Sgl23295 ...
Sgl23450, Sgl24101, Sgl33028, Sgl40822, Sgl53976, Sgl55471, Sgl59310, Sgl59446, Sgl60984, Sgl62170, Sgl66731, Sgl75196, Sgl77769, Sgl78959, Sgl82722
Amaranthaceae Chenopodium album 5 gene:ENSEOMG00000002058, gene:ENSEOMG00000009252 ...
gene:ENSEOMG00000020227, gene:ENSEOMG00000044078, gene:ENSEOMG00000049804
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.4BG0017180, CQ.Regalona.r1.7BG0014940
Anacardiaceae Pistacia vera 4 pistato.v30065960, pistato.v30184240, pistato.v30184650 ...
pistato.v30196580
Apiaceae Apium graveolens 1 Ag7G00029
Brassicaceae Brassica nigra 2 BniB02g000050.2N, BniB05g035450.2N
Plantaginaceae Plantago ovata 54 Pov_00004003, Pov_00004711, Pov_00004712, Pov_00004713 ...
Pov_00006290, Pov_00007084, Pov_00007713, Pov_00008217, Pov_00008218, Pov_00008219, Pov_00008705, Pov_00008708, Pov_00008709, Pov_00009252, Pov_00009462, Pov_00009682, Pov_00010261, Pov_00010262, Pov_00010284, Pov_00011082, Pov_00011616, Pov_00011952, Pov_00014351, Pov_00015822, Pov_00016625, Pov_00017130, Pov_00017151, Pov_00017371, Pov_00017500, Pov_00017501, Pov_00018291, Pov_00018292, Pov_00018873, Pov_00019076, Pov_00019111, Pov_00019572, Pov_00019604, Pov_00019605, Pov_00024169, Pov_00026405, Pov_00028150, Pov_00028151, Pov_00028152, Pov_00029306, Pov_00029864, Pov_00029973, Pov_00031416, Pov_00031874, Pov_00034659, Pov_00035014, Pov_00035443, Pov_00036356, Pov_00036627, Pov_00038666
Plumbaginaceae Limonium bicolor 5 Lb0G37883, Lb1G07087, Lb3G18280, Lb3G19762, Lb5G26493
Poaceae Echinochloa crus-galli 43 AH01.2638, AH01.3064, AH02.2640, AH02.2885, AH02.4139 ...
AH03.1568, AH03.2233, AH03.2355, AH03.2588, AH04.480, AH05.2750, AH05.3408, AH05.629, AH07.1523, AH07.3118, AH07.3519, AH07.3522, BH01.1215, BH01.3692, BH01.4943, BH02.1894, BH02.786, BH04.1370, BH04.2108, BH04.469, BH05.4183, BH06.1700, BH07.1372, BH07.1476, BH08.1240, BH08.197, BH08.2513, BH09.1437, CH02.2412, CH02.3580, CH02.773, CH03.1951, CH03.268, CH04.1222, CH05.3065, CH05.3152, CH05.906, CH07.2545
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_5AG0397530, gene-QOZ80_6BG0487580
Poaceae Hordeum vulgare 32 HORVU.MOREX.r3.1HG0023760.1, HORVU.MOREX.r3.2HG0150520.1 ...
HORVU.MOREX.r3.1HG0034760.1.CDS1, HORVU.MOREX.r3.1HG0048180.1.CDS1, HORVU.MOREX.r3.1HG0068760.1.CDS1, HORVU.MOREX.r3.2HG0106270.1.CDS1, HORVU.MOREX.r3.2HG0136880.1.CDS1, HORVU.MOREX.r3.2HG0154210.1, HORVU.MOREX.r3.2HG0162800.1.CDS1, HORVU.MOREX.r3.2HG0175150.1.CDS1, HORVU.MOREX.r3.2HG0209420.1, HORVU.MOREX.r3.3HG0256350.1.CDS1, HORVU.MOREX.r3.3HG0259980.1, HORVU.MOREX.r3.3HG0314930.1.CDS1, HORVU.MOREX.r3.4HG0337910.1, HORVU.MOREX.r3.4HG0347350.1.CDS1, HORVU.MOREX.r3.4HG0356950.1.CDS1, HORVU.MOREX.r3.4HG0392290.1, HORVU.MOREX.r3.4HG0396050.1, HORVU.MOREX.r3.4HG0397470.1.CDS1, HORVU.MOREX.r3.5HG0447660.1.CDS1, HORVU.MOREX.r3.5HG0511200.1, HORVU.MOREX.r3.6HG0566260.1.CDS1, HORVU.MOREX.r3.6HG0578500.1.CDS1, HORVU.MOREX.r3.6HG0599650.1, HORVU.MOREX.r3.6HG0617440.1, HORVU.MOREX.r3.7HG0672440.1, HORVU.MOREX.r3.7HG0672910.1.CDS1, HORVU.MOREX.r3.7HG0696580.1.CDS1, HORVU.MOREX.r3.7HG0715880.1, HORVU.MOREX.r3.7HG0723070.1, HORVU.MOREX.r3.7HG0735980.1
Poaceae Lolium multiflorum 10 gene-QYE76_003764, gene-QYE76_009617, gene-QYE76_024556 ...
gene-QYE76_031867, gene-QYE76_034788, gene-QYE76_042154, gene-QYE76_052949, gene-QYE76_068735, gene-QYE76_069014, gene-QYE76_069278
Poaceae Oryza coarctata 1 Oco24G004250
Poaceae Paspalum vaginatum 15 gene-BS78_02G030300, gene-BS78_02G055200, gene-BS78_K075900 ...
gene-BS78_03G128000, gene-BS78_03G188400, gene-BS78_03G254400, gene-BS78_03G406100, gene-BS78_04G062700, gene-BS78_04G126800, gene-BS78_06G019800, gene-BS78_06G093700, gene-BS78_09G002700, gene-BS78_09G084000, gene-BS78_09G228800, gene-BS78_10G142600
Poaceae Puccinellia tenuiflora 9 Pt_Chr0106934, Pt_Chr0200848, Pt_Chr0201080, Pt_Chr0302395 ...
Pt_Chr0403953, Pt_Chr0501066, Pt_Chr0501820, Pt_Chr0501882, Pt_Chr0505613
Poaceae Sporobolus alterniflorus 29 Chr01G001760, Chr01G022260, Chr01G023010, Chr02G016090 ...
Chr02G021560, Chr02G024940, Chr02G024960, Chr06G025420, Chr06G025890, Chr07G014790, Chr07G023100, Chr09G015980, Chr09G020310, Chr09G020710, Chr10G002450, Chr10G002460, Chr10G010590, Chr11G001520, Chr11G013920, Chr13G019020, Chr13G019030, Chr17G005800, Chr21G013170, Chr22G017190, Chr25G004890, Chr26G008470, Chr27G003110, Chr28G005960, Chr29G004450
Poaceae Triticum dicoccoides 7 gene_TRIDC1AG023820, gene_TRIDC1AG044510 ...
gene_TRIDC1BG027560, gene_TRIDC2AG018450, gene_TRIDC5AG052350, gene_TRIDC6AG054590, gene_TRIDC7BG072050
Poaceae Zoysia japonica 2 nbis-gene-41619, nbis-gene-46116
Poaceae Zoysia macrostachya 3 Zma_g14123, Zma_g18700, Zma_g23636
Solanaceae Lycium barbarum 4 gene-LOC132636239, gene-LOC132639179, gene-LOC132639362 ...
gene-LOC132642464
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.