halophFGD

Basic Information

Locus ID: Sgl58985

Species & Taxonomic ID: Suaeda glauca & 397272

Genome Assembly: GWHEQCX00000000

Description: transposon protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chrB6	35389917	35392504	+	Sgl58985

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.18	61,035.22 Da	48.66	72.97	-0.71

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF13960	Domain of unknown function (DUF4218)	161	262	2.9E-33	IPR025452
MobiDBLite	mobidb-lite	consensus disorder prediction	452	528	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	504	518	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_048491649.1	uncharacterized protein LOC125492938 [Beta vulgaris subsp. vulgaris]	0
TrEMBL	A0A803N871	DUF4218 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Salicornia bigelovii	1	Sbi_jg61541
Amaranthaceae	Suaeda glauca	65	Sgl03681, Sgl04249, Sgl04994, Sgl04995, Sgl08792, Sgl09205 ... Sgl09338, Sgl10181, Sgl13259, Sgl13963, Sgl14190, Sgl15384, Sgl19106, Sgl19340, Sgl20553, Sgl20747, Sgl21507, Sgl23134, Sgl23186, Sgl25409, Sgl25769, Sgl25933, Sgl26139, Sgl26827, Sgl28244, Sgl28400, Sgl28403, Sgl30591, Sgl30912, Sgl31560, Sgl31600, Sgl32400, Sgl36104, Sgl36910, Sgl37699, Sgl38011, Sgl41405, Sgl43651, Sgl44008, Sgl44357, Sgl44520, Sgl44552, Sgl48425, Sgl48777, Sgl49125, Sgl49285, Sgl49286, Sgl49315, Sgl52675, Sgl53085, Sgl53086, Sgl53444, Sgl53725, Sgl57966, Sgl58363, Sgl58364, Sgl58707, Sgl58985, Sgl64122, Sgl68577, Sgl72472, Sgl76026, Sgl77765, Sgl79036, Sgl81490
Amaranthaceae	Chenopodium quinoa	1	CQ.Regalona.r1.1BG0009940