Basic Information
Locus ID:
Sgl58682
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB6 | 27791146 | 27793686 | + | Sgl58682 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.82 | 16,401.39 Da | 50.71 | 71.34 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04065 | Not1 N-terminal domain, CCR4-Not complex component | 4 | 33 | 2.5E-8 | IPR007207 |
| Pfam | PF02309 | AUX/IAA family | 62 | 146 | 5.6E-26 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 79 | 126 | 7.26E-5 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 78 | 146 | 4.4E-15 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 84 | 149 | 12.140066 | IPR000270 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29080.1 | phytochrome-associated protein 2. phytochrome-associated protein 2 (PAP2) | 0 |
| RefSeq | XP_021765302.1 | auxin-responsive protein IAA27-like [Chenopodium quinoa] | 0 |
| Q9ZSY8 | Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2R4K3I4 | Auxin-responsive protein OS=Bassia scoparia OX=83154 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology