Basic Information
Locus ID:
Sgl58621
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB6 | 26198660 | 26204227 | - | Sgl58621 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 43,024.92 Da | 53.49 | 83.58 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 331 | 374 | 1.78921E-17 | - |
| Pfam | PF13639 | Ring finger domain | 330 | 374 | 8.4E-14 | IPR001841 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 27 | 94 | 9.2E-13 | IPR025287 |
| SUPERFAMILY | SSF57850 | RING/U-box | 325 | 376 | 4.42E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 301 | 378 | 1.6E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 332 | 373 | 1.3E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 332 | 374 | 12.946621 | IPR001841 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53110.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_010676294.2 | RING-H2 finger protein ATL22 [Beta vulgaris subsp. vulgaris] | 0 |
| P0CH01 | Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana OX=3702 GN=ATL21A PE=3 SV=1 | 0 | |
| TrEMBL | A0A803LWI7 | RING-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology