Basic Information
Locus ID:
Sgl58368
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
DNA RNA polymerases superfamily protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB6 | 21406829 | 21407164 | - | Sgl58368 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.62 | 12,814.18 Da | 12.10 | 67.03 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Coils | Coil | Coil | 4 | 24 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021767604.1 | uncharacterized protein LOC110731994 [Chenopodium quinoa] | 0 |
| TrEMBL | A2I5E5 | RNA-directed DNA polymerase OS=Beta vulgaris OX=161934 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Beta vulgaris | 2 | BVRB_4g086710, BVRB_8g189320 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg25647, Sbi_jg35810 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg1509, Seu_jg7247 |
| Amaranthaceae | Suaeda glauca | 30 | Sgl05059, Sgl08276, Sgl09509, Sgl10099, Sgl13129, Sgl14136 ... |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000052022 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.3AG0010420 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb5G26473, Lb8G36574 |