Basic Information
Locus ID:
Sgl57414
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB6 | 8010586 | 8022888 | + | Sgl57414 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.50 | 153,561.28 Da | 41.49 | 80.19 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 967 | 1047 | 8.13231E-15 | - |
| Pfam | PF03732 | Retrotransposon gag protein | 110 | 206 | 2.2E-7 | IPR005162 |
| Pfam | PF14244 | gag-polypeptide of LTR copia-type | 28 | 73 | 2.0E-12 | IPR029472 |
| Pfam | PF00651 | BTB/POZ domain | 965 | 1061 | 6.7E-14 | IPR000210 |
| Pfam | PF00665 | Integrase core domain | 595 | 694 | 9.7E-11 | IPR001584 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 1087 | 1180 | 3.1E-9 | IPR011705 |
| SUPERFAMILY | SSF54695 | POZ domain | 969 | 1061 | 1.8E-13 | IPR011333 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 596 | 766 | 4.17E-38 | IPR012337 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 955 | 1081 | 2.2E-17 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 1095 | 1202 | 2.4E-13 | - |
| Gene3D | G3DSA:3.30.420.10 | - | 586 | 769 | 4.9E-36 | IPR036397 |
| SMART | SM00225 | BTB_4 | 964 | 1064 | 2.9E-8 | IPR000210 |
| SMART | SM00875 | BACK_2 | 1079 | 1181 | 5.8E-8 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 960 | 1033 | 13.777257 | IPR000210 |
| ProSiteProfiles | PS50994 | Integrase catalytic domain profile. | 580 | 757 | 19.962025 | IPR001584 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_021863062.1 | uncharacterized protein LOC110801962 [Spinacia oleracea] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LWD5 | BTB domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||