Basic Information
Locus ID:
Sgl57320
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB6 | 7212215 | 7216278 | + | Sgl57320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.78 | 44,761.32 Da | 46.89 | 95.55 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 206 | 299 | 2.3E-15 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 289 | 403 | 3.81E-6 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 184 | 294 | 8.99E-27 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 166 | 280 | 1.7E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 285 | 383 | 2.4E-11 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 205 | 411 | 14.407506 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 211 | 233 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 389 | 411 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23130.2 | cysteine-rich RLK (RECEPTOR-like protein kinase) 5. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_021743950.1 | cysteine-rich receptor-like protein kinase 10 isoform X2 [Chenopodium quinoa] | 0 |
| Q9C5S8 | Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MST2 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 5 | Sbi_jg23877, Sbi_jg23880, Sbi_jg23881, Sbi_jg23882 ... |
| Amaranthaceae | Salicornia europaea | 4 | Seu_jg12317, Seu_jg12318, Seu_jg12319, Seu_jg12322 |
| Amaranthaceae | Suaeda glauca | 7 | Sgl43696, Sgl48465, Sgl52016, Sgl52017, Sgl52041, Sgl57319 ... |