halophFGD

Basic Information

Locus ID: Sgl56891

Species & Taxonomic ID: Suaeda glauca & 397272

Genome Assembly: GWHEQCX00000000

Description: hsp70-Hsp90 organizing protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chrB6	3675309	3679820	+	Sgl56891

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.90	65,469.08 Da	39.10	65.05	-0.91

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF17830	STI1 domain	521	572	1.3E-14	IPR041243
Pfam	PF17830	STI1 domain	137	190	9.1E-22	IPR041243
Pfam	PF07719	Tetratricopeptide repeat	7	35	7.3E-6	IPR013105
Pfam	PF13414	TPR repeat	398	439	4.7E-9	-
Pfam	PF00515	Tetratricopeptide repeat	70	103	9.4E-9	IPR001440
Pfam	PF13414	TPR repeat	262	300	7.1E-8	-
SUPERFAMILY	SSF48452	TPR-like	390	503	2.25E-43	IPR011990
SUPERFAMILY	SSF48452	TPR-like	251	378	2.43E-41	IPR011990
SUPERFAMILY	SSF48452	TPR-like	2	114	5.4E-42	IPR011990
Gene3D	G3DSA:1.10.260.100	-	510	580	1.2E-27	-
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	390	509	3.3E-37	IPR011990
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	1	116	3.4E-41	IPR011990
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	249	385	2.9E-41	IPR011990
Gene3D	G3DSA:1.10.260.100	-	127	193	1.0E-21	-
SMART	SM00028	tpr_5	327	364	6.5	IPR019734
SMART	SM00028	tpr_5	70	103	5.7E-8	IPR019734
SMART	SM00028	tpr_5	425	458	7.5E-6	IPR019734
SMART	SM00028	tpr_5	286	319	2.5E-4	IPR019734
SMART	SM00028	tpr_5	252	285	0.018	IPR019734
SMART	SM00028	tpr_5	36	69	2.0	IPR019734
SMART	SM00028	tpr_5	2	35	1.9E-4	IPR019734
SMART	SM00028	tpr_5	391	424	0.0016	IPR019734
SMART	SM00727	CBM	136	175	3.9E-8	IPR006636
SMART	SM00727	CBM	529	568	3.0E-8	IPR006636
SMART	SM00028	tpr_5	459	492	6.3E-5	IPR019734
ProSiteProfiles	PS50005	TPR repeat profile.	252	285	9.4109	IPR019734
ProSiteProfiles	PS50005	TPR repeat profile.	70	103	13.4524	IPR019734
ProSiteProfiles	PS50005	TPR repeat profile.	425	458	9.0274	IPR019734
ProSiteProfiles	PS50293	TPR repeat region circular profile.	70	103	10.372186	-
ProSiteProfiles	PS50005	TPR repeat profile.	459	492	9.4109	IPR019734
ProSiteProfiles	PS50005	TPR repeat profile.	36	69	8.3194	IPR019734
ProSiteProfiles	PS50005	TPR repeat profile.	2	35	10.5909	IPR019734
ProSiteProfiles	PS50005	TPR repeat profile.	391	424	10.1484	IPR019734
MobiDBLite	mobidb-lite	consensus disorder prediction	239	261	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	198	261	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	114	128	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	108	130	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	199	230	-	-
Coils	Coil	Coil	235	256	-	-
Coils	Coil	Coil	363	383	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K09553 (stress-induced-phosphoprotein 1)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G62740.1	stress-inducible protein, putative.
RefSeq	XP_021738106.1	hsp70-Hsp90 organizing protein 2-like [Chenopodium quinoa]
Swiss-Prot	Q5XEP2	Hsp70-Hsp90 organizing protein 2 OS=Arabidopsis thaliana OX=3702 GN=HOP2 PE=1 SV=1
TrEMBL	A0A803N3P5	TPR_REGION domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg23371, jg37233
Aizoaceae	Mesembryanthemum crystallinum	1	gene_1932
Amaranthaceae	Atriplex hortensis	1	Ah004749
Amaranthaceae	Beta vulgaris	2	BVRB_5g098030, BVRB_6g145050
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg24337, Sbi_jg8171
Amaranthaceae	Salicornia europaea	1	Seu_jg11847
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00001516
Amaranthaceae	Suaeda glauca	1	Sgl56891
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000008001, gene:ENSEOMG00000020965 ... gene:ENSEOMG00000024273
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.5AG0000580, CQ.Regalona.r1.5BG0000590
Anacardiaceae	Pistacia vera	1	pistato.v30142990
Apiaceae	Apium graveolens	3	Ag6G00625, Ag6G01745, Ag6G02616
Arecaceae	Cocos nucifera	2	COCNU_10G004330, scaffold005462G000020
Arecaceae	Phoenix dactylifera	1	gene-LOC103708511
Asparagaceae	Asparagus officinalis	1	AsparagusV1_10.277.V1.1
Asteraceae	Flaveria trinervia	2	Ftri14G30651, Ftri16G04267
Brassicaceae	Arabidopsis thaliana	3	AT1G12270.1, AT1G62740.1, AT4G12400.2
Brassicaceae	Eutrema salsugineum	3	Thhalv10007205m.g.v1.0, Thhalv10023385m.g.v1.0 ... Thhalv10028542m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp1g10890.v2.2, Sp2g01900.v2.2, Sp6g05150.v2.2
Brassicaceae	Brassica nigra	6	BniB02g007040.2N, BniB02g007050.2N, BniB02g010350.2N ... BniB02g058810.2N, BniB04g021610.2N, BniB05g056300.2N
Casuarinaceae	Casuarina equisetifolia	1	Ceq03G0077
Casuarinaceae	Casuarina glauca	1	Cgl03G0083
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno02g08510, gene.Cymno03g07710
Dunaliellaceae	Dunaliella salina	1	Dusal.0549s00002.v1.0
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate08g06620
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG02.1304, evm.TU.LG10.1243
Plantaginaceae	Plantago ovata	1	Pov_00004214
Plumbaginaceae	Limonium bicolor	2	Lb2G08978, Lb8G36485
Poaceae	Echinochloa crus-galli	6	AH07.2799, AH09.1730, BH07.2609, BH09.1910, CH07.2674 ... CH09.2063
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_2AG0139090, gene-QOZ80_2BG0194740 ... gene-QOZ80_4AG0309120, gene-QOZ80_4BG0340140
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.2HG0184620.1, HORVU.MOREX.r3.6HG0599080.1
Poaceae	Lolium multiflorum	2	gene-QYE76_024019, gene-QYE76_045246
Poaceae	Oryza coarctata	4	Oco03G016570, Oco04G017340, Oco07G011740, Oco08G011420
Poaceae	Oryza sativa	2	LOC_Os02g43020.1, LOC_Os04g45480.1
Poaceae	Paspalum vaginatum	2	gene-BS78_04G211500, gene-BS78_06G172500
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0201606, Pt_Chr0204042, Pt_Chr0207518, Pt_Chr0301875
Poaceae	Sporobolus alterniflorus	6	Chr06G006380, Chr09G024750, Chr13G006270, Chr15G008090 ... Chr25G006440, Chr30G006270
Poaceae	Thinopyrum elongatum	2	Tel2E01G663300, Tel6E01G452300
Poaceae	Triticum dicoccoides	5	gene_TRIDC2AG055670, gene_TRIDC2BG058540 ... gene_TRIDC5AG033520, gene_TRIDC6AG036790, gene_TRIDC6BG043580
Poaceae	Triticum aestivum	7	TraesCS2A02G386800.1, TraesCS2B02G404400.1 ... TraesCS2D02G117300.1, TraesCS2D02G383600.1, TraesCS6A02G238600.1, TraesCS6B02G285800.1, TraesCS6D02G221000.1
Poaceae	Zea mays	3	Zm00001eb075450_P002, Zm00001eb186100_P001 ... Zm00001eb248730_P001
Poaceae	Zoysia japonica	3	nbis-gene-22451, nbis-gene-37197, nbis-gene-9339
Poaceae	Zoysia macrostachya	3	Zma_g13997, Zma_g16761, Zma_g20136
Portulacaceae	Portulaca oleracea	4	evm.TU.LG08.441, evm.TU.LG10.189, evm.TU.LG17.185 ... evm.TU.LG22.1456
Posidoniaceae	Posidonia oceanica	1	gene.Posoc02g19450
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_14_RagTag.312, evm.TU.Scaffold_16_RagTag.294
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-18065, nbisL1-mrna-22535, nbisL1-mrna-31001
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-5215, nbisL1-mrna-7515
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-20233, nbisL1-mrna-8407
Rhizophoraceae	Kandelia candel	2	evm.TU.utg000007l.181, evm.TU.utg000022l.317
Rhizophoraceae	Kandelia obovata	2	Maker00014231, Maker00018599
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-16124, nbisL1-mrna-3456
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-10778, nbisL1-mrna-6583
Salicaceae	Populus euphratica	3	populus_peu03416, populus_peu03417, populus_peu34256
Solanaceae	Lycium barbarum	2	gene-LOC132609834, gene-LOC132635070
Solanaceae	Solanum chilense	1	SOLCI005886600
Solanaceae	Solanum pennellii	1	gene-LOC107028487
Tamaricaceae	Reaumuria soongarica	1	STRG.13614_chr05_+
Tamaricaceae	Tamarix chinensis	1	TC02G0115
Zosteraceae	Zostera marina	1	Zosma01g13100.v3.1