Basic Information
Locus ID:
Sgl56737
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Short Name:
CERK1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB6 | 2339903 | 2345858 | + | Sgl56737 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 60,579.00 Da | 34.58 | 90.25 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 264 | 524 | 1.62049E-86 | - |
| Pfam | PF01476 | LysM domain | 48 | 83 | 0.055 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 260 | 526 | 1.0E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 237 | 527 | 1.62E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 329 | 547 | 3.8E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 230 | 328 | 4.8E-27 | - |
| SMART | SM00220 | serkin_6 | 258 | 529 | 2.3E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 258 | 530 | 38.915863 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 264 | 286 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 373 | 385 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_021771264.1 | chitin elicitor receptor kinase 1-like isoform X1 [Chenopodium quinoa] | 0 |
| A0A0P0XII1 | Chitin elicitor receptor kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9S1I0 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_010050 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology