Basic Information
Locus ID:
Sgl56646
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB6 | 1720437 | 1724176 | - | Sgl56646 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.10 | 108,086.82 Da | 48.08 | 65.41 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 189 | 275 | 2.92299E-30 | - |
| Pfam | PF00855 | PWWP domain | 189 | 275 | 3.5E-20 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 182 | 291 | 4.15E-29 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 178 | 286 | 5.6E-28 | - |
| SMART | SM00293 | PWWP_4 | 189 | 250 | 9.9E-12 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 191 | 252 | 14.001749 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 512 | 540 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 742 | 801 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 451 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 895 | 936 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 541 | 558 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 580 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 905 | 919 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 648 | 680 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 463 | 508 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 655 | 669 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 777 | 793 | - | - |
| Coils | Coil | Coil | 962 | 989 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40340.2 | - | 0 |
| RefSeq | XP_021768148.1 | uncharacterized protein LOC110732506 isoform X2 [Chenopodium quinoa] | 0 |
| Q9FNE4 | PWWP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PDP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L5W2 | PWWP domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology