Basic Information
Locus ID:
Sgl56596
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB6 | 1415953 | 1420230 | + | Sgl56596 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.32 | 52,254.68 Da | 47.05 | 56.06 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 269 | 352 | 1.1E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 270 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 455 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 214 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 412 | 434 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 455 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 252 | - | - |
| Coils | Coil | Coil | 284 | 314 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_010677584.1 | protein WVD2-like 4 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9QG30 | TPX2 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_182970 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology