Basic Information
Locus ID:
Sgl56578
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
ubiquitinyl hydrolase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB6 | 1288388 | 1304362 | + | Sgl56578 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 103,670.70 Da | 46.40 | 76.50 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 755 | 905 | 5.56876E-56 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 316 | 904 | 7.4E-80 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 314 | 906 | 3.14E-106 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 303 | 547 | 5.5E-63 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 631 | 910 | 1.6E-55 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 316 | 907 | 57.441414 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 851 | 868 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 317 | 332 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 653 | 679 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_021769581.1 | ubiquitin carboxyl-terminal hydrolase 8-like isoform X1 [Chenopodium quinoa] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9S241 | Ubiquitin carboxyl-terminal hydrolase OS=Spinacia oleracea OX=3562 GN=SOVF_009050 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology