Basic Information
Locus ID:
Sgl56174
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Ubiquitin fusion degradation protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA6 | 54215678 | 54220127 | + | Sgl56174 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 35,327.58 Da | 60.80 | 66.92 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 14 | 185 | 4.0E-79 | IPR004854 |
| Gene3D | G3DSA:2.40.40.50 | - | 4 | 108 | 9.7E-43 | IPR042299 |
| Gene3D | G3DSA:3.10.330.10 | - | 110 | 183 | 4.6E-34 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 287 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 321 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_010690750.1 | ubiquitin fusion degradation protein 1 homolog isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0K9RPW9 | Ubiquitin fusion degradation protein 1 homolog OS=Spinacia oleracea OX=3562 GN=SOVF_047510 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology