halophFGD

Basic Information

Locus ID: Sgl56149

Species & Taxonomic ID: Suaeda glauca & 397272

Genome Assembly: GWHEQCX00000000

Description: F-Box protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chrA6	54058658	54060106	-	Sgl56149

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.86	55,115.98 Da	39.93	78.42	-0.39

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03478	Protein of unknown function (DUF295)	386	445	4.8E-13	IPR005174
SUPERFAMILY	SSF81383	F-box domain	56	121	7.98E-7	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	59	108	4.8E-5	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_021845050.1	uncharacterized protein LOC110784912 [Spinacia oleracea]	0
TrEMBL	A0A0K9RTW8	DUF295 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_029500 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	1	jg34713
Aizoaceae	Mesembryanthemum crystallinum	9	gene_19582, gene_19584, gene_19585, gene_19586, gene_19587 ... gene_19588, gene_19589, gene_19590, gene_19591
Amaranthaceae	Atriplex hortensis	8	Ah000578, Ah000579, Ah003817, Ah027104, Ah027105, Ah027106 ... Ah034586, Ah039224
Amaranthaceae	Beta vulgaris	1	BVRB_3g063530
Amaranthaceae	Suaeda glauca	2	Sgl56149, Sgl60852
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000019527, gene:ENSEOMG00000021140 ... gene:ENSEOMG00000040513
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.1BG0002490, CQ.Regalona.r1.6AG0002800