Basic Information
Locus ID:
Sgl54719
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
11S globulin seed storage protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA6 | 44653634 | 44666616 | - | Sgl54719 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.17 | 37,762.09 Da | 29.43 | 91.03 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 3 | 157 | 7.43678E-48 | - |
| CDD | cd02243 | cupin_11S_legumin_C | 191 | 346 | 2.70764E-65 | - |
| Pfam | PF00190 | Cupin | 35 | 150 | 1.1E-12 | IPR006045 |
| Pfam | PF00190 | Cupin | 195 | 331 | 1.7E-16 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 29 | 339 | 8.14E-35 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 11 | 185 | 3.5E-29 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 186 | 348 | 8.2E-44 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 182 | 332 | 3.7E-15 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 4 | 151 | 1.2E-6 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 269 | 284 | 4.8E-8 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 203 | 223 | 4.8E-8 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 251 | 267 | 4.8E-8 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 309 | 326 | 4.8E-8 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 287 | 305 | 4.8E-8 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G07750.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_010678486.1 | cocosin 1 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| P04776 | Glycinin G1 OS=Glycine max OX=3847 GN=GY1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9R739 | Cupin type-1 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_098950 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology