Basic Information
Locus ID:
Sgl54648
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA6 | 44180876 | 44198580 | + | Sgl54648 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.79 | 16,289.06 Da | 70.31 | 73.71 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 1 | 136 | 9.17767E-72 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 2 | 135 | 9.3E-52 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 1 | 141 | 1.57E-59 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 1 | 140 | 1.3E-64 | IPR016135 |
| SMART | SM00212 | ubc_7 | 1 | 141 | 9.7E-64 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 1 | 141 | 58.052238 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 68 | 83 | - | IPR023313 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02760.1 | ubiquiting-conjugating enzyme 2. ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene. | 0 |
| RefSeq | XP_006443491.1 | ubiquitin-conjugating enzyme E2 2 [Citrus clementina] | 0 |
| P42745 | Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana OX=3702 GN=UBC2 PE=2 SV=1 | 0 | |
| TrEMBL | V4VU50 | UBC core domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10022673mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology