Basic Information
Locus ID:
Sgl54494
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA6 | 43104206 | 43112394 | - | Sgl54494 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 46,535.10 Da | 44.59 | 77.94 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00025 | ADP-ribosylation factor family | 305 | 411 | 1.5E-26 | IPR006689 |
| Pfam | PF03732 | Retrotransposon gag protein | 144 | 232 | 1.3E-8 | IPR005162 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 304 | 411 | 2.08E-16 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 293 | 412 | 6.2E-36 | IPR027417 |
| SMART | SM00178 | sar_sub_1 | 214 | 411 | 1.2E-44 | IPR006689 |
| ProSiteProfiles | PS51417 | small GTPase Arf family profile. | 134 | 411 | 9.37582 | - |
| ProSiteProfiles | PS51422 | small GTPase SAR1 family profile. | 153 | 411 | 19.490986 | - |
| PRINTS | PR00328 | GTP-binding SAR1 protein signature | 385 | 409 | 9.7E-32 | IPR006689 |
| PRINTS | PR00328 | GTP-binding SAR1 protein signature | 296 | 321 | 9.7E-32 | IPR006689 |
| PRINTS | PR00328 | GTP-binding SAR1 protein signature | 341 | 362 | 9.7E-32 | IPR006689 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 300 | - | - |
| Coils | Coil | Coil | 10 | 30 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko00010 (Glycolysis / Gluconeogenesis)
map00010 (Glycolysis / Gluconeogenesis)
ko00020 (Citrate cycle (TCA cycle))
map00020 (Citrate cycle (TCA cycle))
ko00260 (Glycine, serine and threonine metabolism)
map00260 (Glycine, serine and threonine metabolism)
ko00280 (Valine, leucine and isoleucine degradation)
map00280 (Valine, leucine and isoleucine degradation)
ko00620 (Pyruvate metabolism)
map00620 (Pyruvate metabolism)
ko00630 (Glyoxylate and dicarboxylate metabolism)
map00630 (Glyoxylate and dicarboxylate metabolism)
ko00640 (Propanoate metabolism)
map00640 (Propanoate metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
Module:
Reaction:
R00209 (Pyruvate + CoA + NAD+ <=> Acetyl-CoA + CO2 + NADH + H+)
R01221 (Glycine + Tetrahydrofolate + NAD+ <=> 5,10-Methylenetetrahydrofolate + Ammonia + CO2 + NADH + H+)
R01698 (Dihydrolipoamide + NAD+ <=> Lipoamide + NADH + H+)
R03815 (Dihydrolipoylprotein + NAD+ <=> Lipoylprotein + NADH + H+)
R07618 (Enzyme N6-(dihydrolipoyl)lysine + NAD+ <=> Enzyme N6-(lipoyl)lysine + NADH + H+)
R08549 (2-Oxoglutarate + CoA + NAD+ <=> Succinyl-CoA + CO2 + NADH + H+)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G02620.1 | Ras-related small GTP-binding family protein. | 0 |
| RefSeq | XP_021843394.1 | uncharacterized protein LOC110783367 isoform X2 [Spinacia oleracea] | 0 |
| O04834 | Small COPII coat GTPase SAR1A OS=Arabidopsis thaliana OX=3702 GN=SAR1A PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9S4G8 | GTP-binding protein SAR1A OS=Spinacia oleracea OX=3562 GN=SOVF_001010 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology