Basic Information
Locus ID:
Sgl53567
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
cyclin-dependent kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA6 | 31541209 | 31545289 | - | Sgl53567 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.51 | 19,157.50 Da | 30.15 | 102.16 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 6 | 158 | 1.8E-32 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 158 | 2.16E-40 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 3 | 87 | 1.5E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 88 | 167 | 3.0E-18 | - |
| SMART | SM00220 | serkin_6 | 3 | 165 | 1.5E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 167 | 22.732431 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 125 | 137 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10270.1 | cyclin-dependent kinase C;1. Encodes CDKC;1, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development. | 0 |
| RefSeq | XP_052197580.1 | cyclin-dependent kinase C-2-like [Diospyros lotus] | 0 |
| Q6I5Y0 | Cyclin-dependent kinase C-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKC-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A438FLT7 | Cyclin-dependent kinase C-1 OS=Vitis vinifera OX=29760 GN=CDKC-1_5 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||