Basic Information
Locus ID:
Sgl53025
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
transposon protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA6 | 19994781 | 20001920 | + | Sgl53025 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.52 | 66,717.94 Da | 44.23 | 67.91 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02992 | Transposase family tnp2 | 507 | 586 | 8.6E-37 | IPR004242 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_010679716.2 | uncharacterized protein LOC104895019 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A6P5EGF8 | uncharacterized protein LOC109706142 OS=Ananas comosus OX=4615 GN=LOC109706142 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||