Basic Information
Locus ID:
Sgl52763
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
BURP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA6 | 14421498 | 14429408 | - | Sgl52763 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.06 | 35,886.07 Da | 38.12 | 88.41 | -0.37 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49320.1 | unknown seed protein like 1. Encodes USPL1, a BURP domain protein targeted to the protein storage vacuoles. Overexpression of USPL1 affects seed development, protein storage vacuoles and lipid vesicles morphology and function. | 0 |
| RefSeq | XP_048491899.1 | BURP domain-containing protein 5-like [Beta vulgaris subsp. vulgaris] | 0 |
| Q9XI99 | BURP domain protein USPL1 OS=Arabidopsis thaliana OX=3702 GN=USPL1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2C9W9G7 | BURP domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_03G128100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah024283 |
| Amaranthaceae | Salicornia bigelovii | 12 | Sbi_jg14106, Sbi_jg27750, Sbi_jg32715, Sbi_jg32718 ... |
| Amaranthaceae | Salicornia europaea | 11 | Seu_jg10013, Seu_jg10691, Seu_jg10693, Seu_jg10705 ... |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00019651 |
| Amaranthaceae | Suaeda glauca | 20 | Sgl00053, Sgl00058, Sgl05126, Sgl05131, Sgl05152, Sgl10255 ... |