Basic Information
Locus ID:
Sgl52414
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Domain of unknown function (DUF4283)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA6 | 10301770 | 10303647 | + | Sgl52414 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 69,494.37 Da | 46.95 | 67.87 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14111 | Domain of unknown function (DUF4283) | 127 | 266 | 1.4E-31 | IPR025558 |
| Pfam | PF00098 | Zinc knuckle | 295 | 310 | 4.0E-4 | IPR001878 |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 293 | 314 | 3.14E-5 | IPR036875 |
| SMART | SM00343 | c2hcfinal6 | 295 | 311 | 0.0042 | IPR001878 |
| ProSiteProfiles | PS50158 | Zinc finger CCHC-type profile. | 296 | 310 | 10.394444 | IPR001878 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 374 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 608 | 625 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 567 | 625 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 385 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021849487.1 | uncharacterized protein LOC110789148 [Spinacia oleracea] | 0 |
| TrEMBL | F4NCH1 | CCHC-type domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||