Basic Information
Locus ID:
Sgl52341
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
bHLH-MYC and R2R3-MYB transcription factors N-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA6 | 9747568 | 9748815 | + | Sgl52341 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.64 | 46,383.71 Da | 51.07 | 81.95 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 39 | 189 | 1.1E-21 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 233 | 281 | 5.6E-13 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 233 | 299 | 2.36E-19 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 224 | 298 | 6.3E-20 | IPR036638 |
| SMART | SM00353 | finulus | 237 | 286 | 2.2E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 231 | 280 | 17.402662 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 201 | 222 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 201 | 242 | - | - |
| Coils | Coil | Coil | 270 | 304 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_021855535.1 | transcription factor bHLH14-like [Spinacia oleracea] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RQ50 | BHLH domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_046870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology