Basic Information
Locus ID:
Sgl52130
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
ATPase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA6 | 8117718 | 8126603 | - | Sgl52130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 92,356.26 Da | 47.70 | 87.58 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 550 | 683 | 5.3364E-24 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 552 | 682 | 2.1E-39 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 706 | 748 | 6.8E-12 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 512 | 748 | 6.04E-61 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 63 | 346 | 7.79E-5 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 511 | 768 | 2.2E-98 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 684 | 766 | 2.2E-98 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 38 | 349 | 1.7E-5 | IPR027417 |
| SMART | SM00382 | AAA_5 | 548 | 685 | 1.0E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 655 | 674 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 435 | 477 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 744 | 765 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 435 | 495 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_021838253.1 | uncharacterized protein LOC110777995 [Spinacia oleracea] | 0 |
| Q9P7J5 | Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC24B10.10c PE=3 SV=1 | 0 | |
| TrEMBL | A0A0K9RKA8 | AAA domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_056920 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology