Basic Information
Locus ID:
Sgl52109
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA6 | 7890694 | 7892187 | - | Sgl52109 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 57,659.16 Da | 52.93 | 103.10 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 20 | 58 | 1.7E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 18 | 71 | 3.79E-9 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 147 | 371 | 6.28E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 57 | 387 | 3.4E-7 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 56 | 4.4E-5 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 18 | 68 | 9.179537 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26030.4 | - | 0 |
| RefSeq | XP_021851257.1 | F-box/FBD/LRR-repeat protein At5g22660-like [Spinacia oleracea] | 0 |
| Q9FWZ1 | F-box/LRR-repeat protein 13 OS=Arabidopsis thaliana OX=3702 GN=FBL13 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MF00 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||