Basic Information
Locus ID:
Sgl51866
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
FIZZY-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA6 | 5829022 | 5836732 | + | Sgl51866 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.09 | 55,909.79 Da | 43.87 | 71.04 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 208 | 484 | 2.03429E-39 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 448 | 484 | 5.9E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 319 | 354 | 1.7E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 359 | 399 | 0.0047 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 236 | 295 | 1.0E-5 | IPR024977 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 191 | 492 | 4.03E-61 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 180 | 488 | 1.6E-125 | IPR015943 |
| SMART | SM00320 | WD40_4 | 445 | 484 | 2.6E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 187 | 228 | 140.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 231 | 271 | 0.0091 | IPR001680 |
| SMART | SM00320 | WD40_4 | 274 | 311 | 4.9E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 315 | 354 | 4.1E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 357 | 399 | 3.3E-4 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 239 | 280 | 10.241105 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 281 | 320 | 8.703868 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 452 | 485 | 11.919224 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 322 | 363 | 13.482671 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 322 | 354 | 10.917412 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 452 | 485 | 14.41838 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 471 | 485 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 116 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 56 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22910.1 | FIZZY-related 2. | 0 |
| RefSeq | XP_021735944.1 | protein FIZZY-RELATED 2-like [Chenopodium quinoa] | 0 |
| Q9M7I2 | B-type cell cycle switch protein ccs52A OS=Medicago truncatula OX=3880 GN=CCS52A PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RXT9 | ANAPC4_WD40 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_023120 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology