HalophFGD

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Basic Information
Locus ID: Sgl51202
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description: Protein FAR1-RELATED SEQUENCE 5-like
Maps and Mapping Data
Chromosome Start End Strand ID
chrA6 841599 845356 - Sgl51202
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.07 66,075.87 Da 36.12 74.35 -0.70
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03101 FAR1 DNA-binding domain 112 200 3.2E-17 IPR004330
ProSiteProfiles PS50966 Zinc finger SWIM-type profile. 376 412 9.396204 IPR007527
Gene Ontology
Molecular Function:
GO:0008270 (zinc ion binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_048498353.1 protein FAR1-RELATED SEQUENCE 5-like [Beta vulgaris subsp. vulgaris] 0
TrEMBL A0A803LWS5 Protein FAR1-RELATED SEQUENCE OS=Chenopodium quinoa OX=63459 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda aralocaspica 4 GOSA_00014604, GOSA_00014605, GOSA_00014807, GOSA_00023619
Amaranthaceae Suaeda glauca 69 Sgl00340, Sgl00670, Sgl00740, Sgl00768, Sgl02587, Sgl03588 ...
Sgl04848, Sgl05396, Sgl05687, Sgl05773, Sgl06654, Sgl07743, Sgl08711, Sgl08712, Sgl09291, Sgl09891, Sgl10123, Sgl11267, Sgl12085, Sgl12211, Sgl12282, Sgl13848, Sgl13857, Sgl15315, Sgl15331, Sgl16659, Sgl17379, Sgl17449, Sgl17512, Sgl19021, Sgl20279, Sgl21137, Sgl24726, Sgl25611, Sgl26501, Sgl30781, Sgl32060, Sgl32061, Sgl34323, Sgl34325, Sgl34387, Sgl36019, Sgl37352, Sgl39724, Sgl39726, Sgl43147, Sgl43248, Sgl44007, Sgl46477, Sgl47605, Sgl48076, Sgl48776, Sgl50199, Sgl51202, Sgl55534, Sgl64142, Sgl68597, Sgl70548, Sgl73296, Sgl76815, Sgl78827, Sgl78928, Sgl79630, Sgl79779, Sgl79784, Sgl81389, Sgl82092, Sgl82226, Sgl82229
Plumbaginaceae Limonium bicolor 3 Lb0G37147, Lb3G20849, Lb6G29885
Tamaricaceae Reaumuria soongarica 2 MSTRG.16888_chr09_+, STRG.24247_chr10_+
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.