Basic Information
Locus ID:
Sgl50881
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Ribonuclease H protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB5 | 57865194 | 57869863 | + | Sgl50881 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.42 | 99,783.06 Da | 43.52 | 62.25 | -0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 60 | 145 | 2.7E-13 | IPR001245 |
| Pfam | PF14111 | Domain of unknown function (DUF4283) | 279 | 415 | 1.2E-23 | IPR025558 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 37 | 161 | 1.22E-27 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 19 | 132 | 7.1E-36 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 57 | 446 | 9.163792 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 63 | 85 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 608 | 638 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 202 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 683 | 702 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 842 | 902 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 802 | 823 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 683 | 786 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 709 | 734 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_048502660.1 | uncharacterized protein LOC125498487 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0J8CWJ5 | DUF4283 domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_2g033230 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||