Basic Information
Locus ID:
Sgl50876
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB5 | 57818599 | 57834868 | - | Sgl50876 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 158,944.09 Da | 44.87 | 84.68 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 882 | 960 | 1.4E-9 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 656 | 715 | 2.0E-8 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 1020 | 1109 | 2.4E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 16 | 114 | 2.6E-20 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 134 | 226 | 2.6E-10 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1244 | 1376 | 3.8E-11 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 395 | 584 | 3.0E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1196 | 1388 | 1.84E-28 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 379 | 584 | 4.32E-68 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 641 | 822 | 1.03E-23 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 123 | 230 | 9.0E-21 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 8 | 116 | 1.0E-23 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 1007 | 1111 | 8.6E-22 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 622 | 718 | 2.2E-27 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 860 | 963 | 8.0E-18 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1190 | 1242 | 3.4E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 354 | 470 | 1.2E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 719 | 817 | 5.5E-8 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 471 | 585 | 1.4E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1243 | 1384 | 5.3E-31 | - |
| SMART | SM00220 | serkin_6 | 394 | 695 | 9.9E-21 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 856 | 963 | 15.375442 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1005 | 1111 | 16.950508 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 394 | 709 | 31.566181 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 123 | 230 | 16.923351 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 10 | 117 | 19.195429 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1212 | 1234 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 659 | 681 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 516 | 528 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 400 | 423 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1404 | 1431 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1405 | 1422 | - | - |
| Coils | Coil | Coil | 287 | 307 | - | - |
| Coils | Coil | Coil | 360 | 380 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_006449119.2 | uncharacterized protein LOC18052709 [Citrus clementina] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A836Y173 | Cysteine-rich receptor protein OS=Salix suchowensis OX=1278906 GN=IMY05_011G0018300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22061 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg40868, Sbi_jg40875 |
| Amaranthaceae | Salicornia europaea | 3 | Seu_jg1602, Seu_jg1603, Seu_jg4259 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017178 |
| Amaranthaceae | Suaeda glauca | 5 | Sgl46180, Sgl46197, Sgl50876, Sgl50880, Sgl50932 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000010508, gene:ENSEOMG00000031315 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0002470, CQ.Regalona.r1.8BG0002450 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG01.1797, evm.TU.LG18.811, evm.TU.LG20.1079 ... |