Basic Information
Locus ID:
Sgl50873
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB5 | 57801705 | 57804867 | + | Sgl50873 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.37 | 75,516.24 Da | 37.94 | 82.01 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 353 | 621 | 4.08249E-101 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 163 | 257 | 4.7E-11 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 349 | 619 | 8.9E-50 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 33 | 134 | 4.7E-16 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 331 | 639 | 3.78E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 423 | 625 | 1.2E-60 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 149 | 260 | 7.1E-21 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 308 | 422 | 3.2E-37 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 29 | 137 | 1.9E-20 | IPR038408 |
| SMART | SM00220 | serkin_6 | 347 | 600 | 3.7E-39 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 26 | 137 | 17.873823 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 347 | 633 | 40.329262 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 149 | 260 | 17.068186 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 468 | 480 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 353 | 375 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021719580.1 | putative receptor-like protein kinase At4g00960 isoform X1 [Chenopodium quinoa] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A6A1WG79 | Cysteine-rich receptor-like protein kinase 25 OS=Morella rubra OX=262757 GN=CJ030_MR2G008566 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017174 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl46171, Sgl46195, Sgl50867, Sgl50873 |