Basic Information
Locus ID:
Sgl50868
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB5 | 57752291 | 57756066 | + | Sgl50868 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.49 | 69,735.95 Da | 43.55 | 80.82 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 36 | 137 | 3.3E-20 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 466 | 567 | 1.4E-7 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 166 | 259 | 7.6E-9 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 370 | 454 | 2.5E-16 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 351 | 591 | 5.19E-48 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 152 | 262 | 3.4E-19 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 446 | 575 | 2.1E-15 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 28 | 140 | 5.0E-25 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 326 | 441 | 4.9E-36 | - |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 149 | 262 | 16.344017 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 28 | 140 | 19.059647 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 366 | 620 | 13.969353 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 372 | 394 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 295 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_024156921.1 | cysteine-rich receptor-like protein kinase 10 [Rosa chinensis] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2P6Q327 | Cysteine-rich receptor-like protein kinase 10 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0004231 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 4 | Sgl46172, Sgl46196, Sgl50868, Sgl50874 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8AG0002610 |