Basic Information
Locus ID:
Sgl50867
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB5 | 57741169 | 57751482 | + | Sgl50867 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 164,808.88 Da | 42.33 | 75.85 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14244 | gag-polypeptide of LTR copia-type | 31 | 78 | 2.4E-13 | IPR029472 |
| Pfam | PF01657 | Salt stress response/antifungal | 921 | 1022 | 8.3E-16 | IPR002902 |
| Pfam | PF13976 | GAG-pre-integrase domain | 490 | 546 | 8.4E-7 | IPR025724 |
| Pfam | PF03732 | Retrotransposon gag protein | 97 | 200 | 1.8E-7 | IPR005162 |
| Pfam | PF00069 | Protein kinase domain | 1240 | 1302 | 6.6E-9 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1304 | 1436 | 4.2E-14 | IPR001245 |
| Pfam | PF00665 | Integrase core domain | 560 | 643 | 1.9E-8 | IPR001584 |
| Pfam | PF01657 | Salt stress response/antifungal | 1051 | 1148 | 1.1E-9 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1222 | 1460 | 6.88E-46 | IPR011009 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 560 | 729 | 2.73E-39 | IPR012337 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1199 | 1303 | 1.2E-29 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 1039 | 1151 | 3.5E-19 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 916 | 1025 | 9.3E-20 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1304 | 1442 | 1.5E-26 | - |
| Gene3D | G3DSA:3.30.420.10 | - | 553 | 731 | 2.0E-39 | IPR036397 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1146 | 1441 | 13.983486 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 914 | 1025 | 18.091072 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1044 | 1151 | 16.651789 | IPR002902 |
| ProSiteProfiles | PS50994 | Integrase catalytic domain profile. | 557 | 721 | 20.523663 | IPR001584 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1244 | 1266 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 836 | 873 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 323 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021837735.1 | uncharacterized protein LOC110777440 [Spinacia oleracea] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2K3MQ97 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Trifolium pratense OX=57577 GN=L195_g016049 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017174 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl46171, Sgl46195, Sgl50867, Sgl50873 |