Basic Information
Locus ID:
Sgl50831
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB5 | 57518229 | 57521457 | - | Sgl50831 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 65,584.28 Da | 48.20 | 78.65 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 371 | 455 | 2.6E-15 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 33 | 127 | 1.6E-21 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 149 | 241 | 2.0E-10 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 347 | 458 | 2.6E-27 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 451 | 538 | 9.0E-8 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 25 | 129 | 9.3E-25 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 138 | 243 | 1.0E-16 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 344 | 443 | 3.8E-36 | - |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 136 | 244 | 14.551701 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 368 | 584 | 13.347456 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 28 | 130 | 19.24069 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 374 | 396 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 271 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 553 | 584 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021766958.1 | cysteine-rich receptor-like protein kinase 10 isoform X1 [Chenopodium quinoa] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803NDA4 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Beta vulgaris | 2 | BVRB_8g187030, BVRB_8g187180 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg40991 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl46131, Sgl46132, Sgl50830, Sgl50831 |