Basic Information
Locus ID:
Sgl50781
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB5 | 57156398 | 57162200 | + | Sgl50781 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 63,033.06 Da | 27.69 | 87.98 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 26 | 186 | 2.64828E-90 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 384 | 567 | 1.43942E-85 | - |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 430 | 554 | 3.3E-15 | IPR011766 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 219 | 335 | 2.9E-22 | IPR012000 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 23 | 189 | 4.5E-35 | IPR012001 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 384 | 579 | 5.9E-43 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 214 | 361 | 8.59E-34 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 22 | 198 | 1.16E-43 | IPR029061 |
| Gene3D | G3DSA:3.40.50.1220 | - | 208 | 371 | 3.9E-44 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 378 | 566 | 2.0E-55 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 20 | 194 | 1.3E-59 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 18 | 579 | 8.7E-207 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01320.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_021852848.1 | pyruvate decarboxylase 1 [Spinacia oleracea] | 0 |
| P51850 | Pyruvate decarboxylase 1 OS=Pisum sativum OX=3888 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6P4M4E5 | pyruvate decarboxylase OS=Gossypium arboreum OX=29729 GN=LOC108453699 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology