halophFGD

Basic Information

Locus ID: Sgl50335

Species & Taxonomic ID: Suaeda glauca & 397272

Genome Assembly: GWHEQCX00000000

Description: Myb/SANT-like DNA-binding domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chrB5	53800278	53804604	+	Sgl50335

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.04	48,348.64 Da	33.63	89.13	-0.13

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF81383	F-box domain	32	143	2.75E-9	IPR036047

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT3G06240.1	F-box family protein.	0
RefSeq	XP_021733996.1	F-box/kelch-repeat protein At3g23880-like [Chenopodium quinoa]	0
Swiss-Prot	Q8GXC7	F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g06240 PE=2 SV=1	0
TrEMBL	A0A803L9K0	F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Atriplex hortensis	13	Ah001920, Ah003798, Ah004407, Ah004408, Ah004409, Ah008157 ... Ah010458, Ah010828, Ah010831, Ah022482, Ah032943, Ah038021, Ah038025
Amaranthaceae	Beta vulgaris	2	BVRB_9g204180, BVRB_9g219200
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg17163, Sbi_jg27532, Sbi_jg52462, Sbi_jg61771
Amaranthaceae	Salicornia europaea	3	Seu_jg20871, Seu_jg423, Seu_jg7781
Amaranthaceae	Suaeda aralocaspica	11	GOSA_00000873, GOSA_00000881, GOSA_00011522, GOSA_00011523 ... GOSA_00013418, GOSA_00015200, GOSA_00015210, GOSA_00017501, GOSA_00019733, GOSA_00019734, GOSA_00019739
Amaranthaceae	Suaeda glauca	22	Sgl11782, Sgl17271, Sgl24939, Sgl30083, Sgl33301, Sgl38521 ... Sgl38541, Sgl38559, Sgl45548, Sgl45549, Sgl45550, Sgl45552, Sgl50333, Sgl50335, Sgl50336, Sgl78539, Sgl78553, Sgl78621, Sgl78622, Sgl81029, Sgl81099, Sgl81100
Amaranthaceae	Chenopodium album	10	gene:ENSEOMG00000016276, gene:ENSEOMG00000021311 ... gene:ENSEOMG00000025450, gene:ENSEOMG00000032638, gene:ENSEOMG00000035631, gene:ENSEOMG00000037957, gene:ENSEOMG00000038425, gene:ENSEOMG00000039745, gene:ENSEOMG00000051485, gene:ENSEOMG00000051554
Amaranthaceae	Chenopodium quinoa	15	CQ.Regalona.r1.3BG0025960, CQ.Regalona.r1.3BG0025970 ... CQ.Regalona.r1.4AG0010490, CQ.Regalona.r1.4BG0020100, CQ.Regalona.r1.4BG0020110, CQ.Regalona.r1.5AG0016500, CQ.Regalona.r1.5AG0016510, CQ.Regalona.r1.5BG0001640, CQ.Regalona.r1.5BG0017780, CQ.Regalona.r1.5BG0020740, CQ.Regalona.r1.7BG0009400, CQ.Regalona.r1.7BG0009410, CQ.Regalona.r1.9AG0013250, CQ.Regalona.r1.9AG0015130, CQ.Regalona.r1.9AG0015140
Poaceae	Lolium multiflorum	1	gene-QYE76_057782