Basic Information
Locus ID:
Sgl50310
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB5 | 53556070 | 53563590 | + | Sgl50310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 64,136.09 Da | 35.87 | 81.49 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 161 | 247 | 1.9E-9 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 32 | 134 | 7.2E-15 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 420 | 521 | 2.1E-10 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 336 | 553 | 1.85E-33 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 24 | 136 | 2.7E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 313 | 398 | 1.5E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 405 | 531 | 1.2E-25 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 148 | 250 | 1.6E-14 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 26 | 137 | 17.375957 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 146 | 250 | 14.524545 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 358 | 380 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021854541.1 | cysteine-rich receptor-like protein kinase 10 [Spinacia oleracea] | 0 |
| O65468 | Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=3 SV=2 | 0 | |
| TrEMBL | A0A803NCS0 | Cysteine-rich receptor-like protein kinase 10 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00011414 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl45534, Sgl46430, Sgl50310 |