Basic Information
Locus ID:
Sgl50148
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB5 | 51851930 | 51853417 | - | Sgl50148 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.66 | 58,000.09 Da | 46.66 | 102.50 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 19 | 57 | 5.5E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 92 | 376 | 5.49E-11 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 17 | 64 | 2.49E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 57 | 2.7E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 58 | 387 | 2.9E-11 | IPR032675 |
| SMART | SM00579 | 9598neu4hmm | 394 | 478 | 2.7E-4 | IPR006566 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 17 | 64 | 8.702637 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58860.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_021851257.1 | F-box/FBD/LRR-repeat protein At5g22660-like [Spinacia oleracea] | 0 |
| Q9LXR6 | Putative F-box protein At3g58860 OS=Arabidopsis thaliana OX=3702 GN=At3g58860 PE=4 SV=1 | 0 | |
| TrEMBL | A0A803N0E2 | FBD domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||