Basic Information
Locus ID:
Sgl49846
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
cyclin-dependent kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB5 | 48185099 | 48187516 | + | Sgl49846 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.49 | 18,442.46 Da | 26.36 | 99.32 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 152 | 6.8E-36 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 8 | 152 | 2.97E-44 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 82 | 161 | 3.0E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 3 | 81 | 1.1E-26 | - |
| SMART | SM00220 | serkin_6 | 8 | 159 | 4.4E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 161 | 25.333088 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 119 | 131 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10270.1 | cyclin-dependent kinase C;1. Encodes CDKC;1, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development. | 0 |
| RefSeq | XP_048503511.1 | cyclin-dependent kinase C-2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LFT8 | Cyclin-dependent kinase C-1 OS=Arabidopsis thaliana OX=3702 GN=CDKC-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A438FLT7 | Cyclin-dependent kinase C-1 OS=Vitis vinifera OX=29760 GN=CDKC-1_5 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||