Basic Information
Locus ID:
Sgl49813
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB5 | 47674976 | 47687554 | - | Sgl49813 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 133,196.42 Da | 41.01 | 90.31 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 19 | 123 | 2.56827E-45 | - |
| Pfam | PF03000 | NPH3 family | 213 | 476 | 8.7E-95 | IPR027356 |
| Pfam | PF03000 | NPH3 family | 788 | 1051 | 8.7E-95 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 27 | 113 | 9.4E-6 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 618 | 689 | 2.28E-7 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 17 | 114 | 1.02E-15 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 10 | 116 | 6.7E-11 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 788 | 1075 | 94.202644 | IPR027356 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 213 | 500 | 94.202644 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 97 | 10.406092 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 837 | 856 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1177 | 1205 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 281 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 837 | 858 | - | - |
| Coils | Coil | Coil | 1123 | 1150 | - | - |
| Coils | Coil | Coil | 548 | 575 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_021725340.1 | BTB/POZ domain-containing protein At1g30440-like [Chenopodium quinoa] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0E0KG87 | NPH3 domain-containing protein OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology