Basic Information
Locus ID:
Sgl48661
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Short Name:
CAX2
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB5 | 21982475 | 22009128 | - | Sgl48661 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.95 | 106,298.01 Da | 37.11 | 93.14 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 260 | 350 | 4.84705E-18 | - |
| Pfam | PF03732 | Retrotransposon gag protein | 12 | 93 | 7.9E-10 | IPR005162 |
| Pfam | PF08284 | Retroviral aspartyl protease | 240 | 369 | 1.4E-32 | - |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 801 | 938 | 1.2E-18 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 607 | 763 | 6.7E-20 | IPR004837 |
| SUPERFAMILY | SSF50630 | Acid proteases | 254 | 357 | 6.06E-10 | IPR021109 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 423 | 518 | 6.45E-28 | IPR043502 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 241 | 375 | 5.4E-18 | IPR021109 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 436 | 579 | 1.8E-27 | - |
| Gene3D | G3DSA:1.20.1420.30 | - | 637 | 942 | 1.3E-28 | IPR044880 |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 589 | 941 | 3.6E-101 | IPR004798 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 578 | 941 | 1.8E-113 | - |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 270 | 281 | - | IPR001969 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 206 | 239 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_010687286.1 | vacuolar cation/proton exchanger 2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q5KQN0 | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9RDD6 | Vacuolar cation/proton exchanger OS=Spinacia oleracea OX=3562 GN=SOVF_079600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology