Basic Information
Locus ID:
Sgl48535
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
B3 DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB5 | 20045575 | 20049485 | - | Sgl48535 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.09 | 24,421.81 Da | 26.66 | 89.17 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 43 | 119 | 9.42E-13 | IPR015300 |
| SUPERFAMILY | SSF68906 | SAP domain | 173 | 208 | 1.36E-5 | IPR036361 |
| Gene3D | G3DSA:2.40.330.10 | - | 30 | 121 | 1.0E-12 | IPR015300 |
| Gene3D | G3DSA:1.10.720.30 | SAP domain | 158 | 215 | 1.7E-6 | IPR036361 |
| ProSiteProfiles | PS50863 | B3 DNA-binding domain profile. | 44 | 120 | 9.840676 | IPR003340 |
| ProSiteProfiles | PS50800 | SAP motif profile. | 174 | 208 | 8.907411 | IPR003034 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_050913107.1 | B3 domain-containing transcription factor VRN1-like [Pisum sativum] | 0 |
| TrEMBL | A0A2P5FY18 | B3 DNA binding domain containing protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_016610 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||