Basic Information
Locus ID:
Sgl48483
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB5 | 19292224 | 19295780 | - | Sgl48483 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.15 | 52,904.54 Da | 45.95 | 88.75 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 161 | 430 | 9.01527E-95 | - |
| Pfam | PF00069 | Protein kinase domain | 156 | 426 | 8.7E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 140 | 457 | 2.76E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 117 | 230 | 4.8E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 231 | 439 | 6.4E-58 | - |
| SMART | SM00220 | serkin_6 | 155 | 433 | 3.6E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 155 | 433 | 36.880566 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 278 | 290 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 161 | 183 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 115 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 95 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021730926.1 | cysteine-rich receptor-like protein kinase 5 [Chenopodium quinoa] | 0 |
| O65468 | Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=3 SV=2 | 0 | |
| TrEMBL | A0A803MST2 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg4150, Seu_jg4156 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl43712, Sgl48483 |